BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H09SP1|AL426607
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1522 1570 0.0
>3x_Contig1522
Length = 7810
Score = 1570 bits (790), Expect = 0.0
Identities = 818/827 (98%), Gaps = 2/827 (0%)
Strand = Plus / Minus
Query: 3 actcggatatatatgatatttatttctcacttttcgtagctaccccagttcttttcctgt 62
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4587 actcggatatatacgatatttatttctcacttttcgtagctaccccagttcttttcctgt 4528
Query: 63 tgaaatctgttccttatmatgcacgtggatatgaattggagttamagattaagcttttaa 122
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4527 tgaaatctgttccttatcatgcacgtggatatgaattggagttacagattaagcttttaa 4468
Query: 123 ggtttgagccgatytttacttggaatgcgaaactgcccggtgcagaaacagaaacggaaa 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4467 ggtttgagccgatctttacttggaatgcgaaactgcccggtgcagaaacagaaacggaaa 4408
Query: 183 caaagcaatagcatgaagtcgagcattttgaagggtttgcattgatcgtatattttccca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4407 caaagcaatagcatgaagtcgagcattttgaagggtttgcattgatcgtatattttccca 4348
Query: 243 agcgcag-tgganaagnagagagggttttatttattttgagaataatgttttcagtacat 301
||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 agcgcagcttgggaag-agagagggttttatttattttgagaataatgttttcagtacat 4289
Query: 302 agtgatgattcatgtatcaatgaggctttcttaagttatgcaagctgtgtgtagagtcgt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 agtgatgattcatgtatcaatgaggctttcttaagttatgcaagctgtgtgtagagtcgt 4229
Query: 362 catcccttcatttcaatttggacaagtcgtatggagtagagtttacagtgatgatctctt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 catcccttcatttcaatttggacaagtcgtatggagtagagtttacagtgatgatctctt 4169
Query: 422 cgtacaatagtgtagttaaaaattcgctgaatttttcaccggtgatttcaggttcgaagt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 cgtacaatagtgtagttaaaaattcgctgaatttttcaccggtgatttcaggttcgaagt 4109
Query: 482 atgtagcagctagctcgaacttgttagcatcaccaacaggagacttggcagctagttctt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4108 atgtagcagctagctcgaacttgttagcatcaccaacaggagacttggcagctagttctt 4049
Query: 542 tagcttgttggtaaagaatttccttagcaagtgcaggagtgacttgtttaccagtatcct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4048 tagcttgttggtaaagaatttccttagcaagtgcaggagtgacttgtttaccagtatcct 3989
Query: 602 ttaacacaatcttatgcttgacccattggtgtagctgacaacgggacacttcagcggtgg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3988 ttaacacaatcttatgcttgacccattggtgtagctgacaacgggacacttcagcggtgg 3929
Query: 662 cagcgtcttccatcaagttattgattggaacacaaccacttcctctcaaccaagcctcca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3928 cagcgtcttccatcaagttattgattggaacacaaccacttcctctcaaccaagcctcca 3869
Query: 722 tatattgcaaaccaatgtctaagttttgcttgataccggcagtagtaatttcaccacctt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3868 tatattgcaaaccaatgtctaagttttgcttgataccggcagtagtaatttcaccacctt 3809
Query: 782 cgatgttagtgtttaacaagtctgaggcagcgacagaagtttctggc 828
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3808 cgatgttagtgtttaacaagtctgaggcagcgacagaagtttctggc 3762
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5943
Number of Sequences: 1807
Number of extensions: 5943
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)